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yfiR [2017-8-11 16:0:3]
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yfiR [2017-8-11 16:0:3]

transcriptional regulator (TetR family) of the yfiS-yfiR operon
locus
BSU08370
pI
5.02
mw
23.54 kDa
protein length
205 aa Sequence Blast
gene length
615 bp Sequence Blast
function
control of yfiS expression
product
transcriptional regulator (TetR family)
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    911,964 → 912,581

    The protein

    Protein family

  • [SW|TetR family]

    • Structure

  • [PDB|1RKT] [Pubmed|16862575]

    • Expression and Regulation

    Operons

    genes
    [gene|09D56215645F3E13803704F96FC6AD3FAAD58EF4|yfiS]-[gene|15DE8BAFB36296B5842E283C836D600755786397|yfiR]
    description
    (according to [http://dbtbs.hgc.jp/COG/prom/yfiSR.html DBTBS]) null

    regulatory mechanism

  • [protein|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|TnrA]: activation, [Pubmed|25755103], in [regulon|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|TnrA regulon]
  • [protein|15DE8BAFB36296B5842E283C836D600755786397|YfiR]: repression, [pubmed|], in [regulon|15DE8BAFB36296B5842E283C836D600755786397|YfiR regulon]
    • view in new tab

    genes
    [gene|15DE8BAFB36296B5842E283C836D600755786397|yfiR]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C356 (yfiR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2354 NBRP B. subtilis, Japan]

    • References

    Reviews

  • 24006471

    • Original publications

  • 25755103,16862575,22383849